Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTLRTLCVLMILSGVIFFGLKIDAKDIDIPFLNSLKKVVSDSDTDSAANSKKELKGSAKPLDVILYNQMDAPRLYNGCEVTSLAMVLNYAGYDVTKNTLANQVATVPLTYSSGLKGDPNDGFVGDM--ANGPGLGVYHRPIYQLAKTYAGDKVSDLTGKSISAVYQQLEKGNPVWVITTANFTPVDNM--QTWKTPNGTIEITYSEHSVAVTGYDDKYVYLNDPY-GYKNRKTDRTSFEKAWKQMGSQAVVIQK---
3ERV Chain:A ((29-228))-------------------------------------------------------DEKVILSNVPFIQQL--PELDRGCEVTSLAMMLQYAGITVDKMKLANEIKKVD-FMNDGVRGNPNEGFVGNIYTFSESGYGVYHGPLFQLAKKYLPNKAVDLTGKSIEELYKSVKAGQPVVIITNATFAPLDEDEFTTWETNNGDVSITYNEHCVVLIGYDQESVYIRDPLKDSLDVKVPREKFEQAWVQMGSQAISYVKRSK


General information:
TITO was launched using:
RESULT:

Template: 3ERV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1010 14010 13.87 72.97
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 13.87
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.570

(partial model without unconserved sides chains):
PDB file : Tito_3ERV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ERV-query.scw
PDB file : Tito_Scwrl_3ERV.pdb: