Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKTDRHPVSGANSLWHVYQTVPFLKVVKNFIVIQIARYTPFIGMKNWLYRTFLRMKVGKQTSFALMVMPDIMFPEKISVGTNTIIGYNTTILAHEYLIH-------EYRIGKVLIGDEVMIGANTTILPGVKIGDGAVVSAGTLVHKDVPDGAFVGGNPMRIIYTKEEMQERLKKSAE
1OCX Chain:A ((72-181))------------------------------------------------------NIFLGNNFFANFDCVML--DVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGAVVTKDVPDNVVVGGNPARIIKK-------------


General information:
TITO was launched using:
RESULT:

Template: 1OCX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 512 -44474 -86.86 -431.79
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : -86.86
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.447

(partial model without unconserved sides chains):
PDB file : Tito_1OCX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OCX-query.scw
PDB file : Tito_Scwrl_1OCX.pdb: