Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGESTSLKEILSTLTKRILLIMIVTAAATAAGGLISFFALTPIYENSTQILVNQSKNERKEVQFNDVQTNLQLINTYNVIIKSPAILDEVIKEMGLSMTSQELNDKITVSSEQDSQVVNISVRDENAETAAHIANTIASVFQDKITSIMNVDNVSILSKAEVSEHPSPVSPKPLLNIAIAFAAGLAGSI---------GLAFLLEHLDNTIKSEEQLESL---LDIPVLGTVSTIANEQKTAKTLQGFQSEKTGSGHFGA
1Y5R Chain:A ((104-204))-----------------------------------------------------------------------------------------------------------------------------------HITQTSLSLFHDDIHSVRRVMEVNFLSYVVMSTAALPMLKQS--NGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTELYITKVNVSITLCVLGLIDT--------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Y5R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 255 -16204 -63.54 -182.06
target 2D structure prediction score : 0.30
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -63.54
2D Compatibility (Sec. Struct. Predict.) : 0.30
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.228

(partial model without unconserved sides chains):
PDB file : Tito_1Y5R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y5R-query.scw
PDB file : Tito_Scwrl_1Y5R.pdb: