Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTRSYENEEGVNVYVTEVLADTVRFMDPKPREKAAD
3VDY Chain:A ((4-107))MFNQVMLVGRLTKDPDLRYTSAGAAVAHVTLAVNRSFKNASGEIEADYVNCTLWRKTAENTALYCQKGSLVGVSGRIQTRSYE----VNVYVTEVLADTVRFMD---------


General information:
TITO was launched using:
RESULT:

Template: 3VDY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 410 -50821 -123.95 -508.21
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.98

3D Compatibility (PKB) : -123.95
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.98
QMean score : 0.470

(partial model without unconserved sides chains):
PDB file : Tito_3VDY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VDY-query.scw
PDB file : Tito_Scwrl_3VDY.pdb: