Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNFYRVEQMPGFIKTEMQKIQKAVQPFMKKTVIYRFLAIPLAAFSLFNL--------------AAFLFHA---SADRESLISAGIFALLAALGLAFFKEAGYQHKQIQKTVHIYMLNRIKKSEILSEERKSSYARQIKEEPFAMRSFVEFLTEEDRRKKMY
3EJD Chain:B ((105-227))------ESYQPYIIETVHHLLDQVQGKKKMEVISDF-AFPLASFVIANIIGVPEEDREQLKEWAASLIQTIDFTRSRKALTEGNIMAVQA---MAYFKELIQKRKRHPQQDMISMLLKG---DKLTEEEAAS-----------------------------


General information:
TITO was launched using:
RESULT:

Template: 3EJD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 198 -8743 -44.16 -85.72
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain B : 0.69

3D Compatibility (PKB) : -44.16
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.184

(partial model without unconserved sides chains):
PDB file : Tito_3EJD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EJD-query.scw
PDB file : Tito_Scwrl_3EJD.pdb: