Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERKTVLYIAVSLDGMIAKEDGSIDWLDE--FEGEGDNGYSDFYQTVDTVILGRSTYEHV-KVLTP-VFPYQDKTCYVFTGSPDSYQDEHVTFINEGARAFTARLKQEKGSNIWIAGGAELVNDFMKEDAIDEFIITVIPVVLGSGIPLFHELTNETKLRLKGTKQFGQAVQLHYVRA
3JTW Chain:A ((4-178))--RKVILFIAMSIDNYIADDQGAVDWLEKNVHGTESDDSYEKMYSKIDTVIMGRTTYEQVTQKLSPEKYVYADRQTYIVTSHLGEDTDK-IKYWKQSPVELVKRIQKEKGKDVWIVGGAKIIDPLVQANLIDTYILTTVPIFLGSGIRLFDRLEEQVPVRLIDVYQKNELVYSIYQRG


General information:
TITO was launched using:
RESULT:

Template: 3JTW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 768 -27273 -35.51 -159.49
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain A : 0.83

3D Compatibility (PKB) : -35.51
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.581

(partial model without unconserved sides chains):
PDB file : Tito_3JTW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JTW-query.scw
PDB file : Tito_Scwrl_3JTW.pdb: