Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MKALIPKQHGAWA-MLLIPFLLGMVKGGPVIWH---IPLFLGWLFLYLAVYPVTLALKKKQSKPYQKWMCYYGFPTCCF----------LMISVFHKPPLIWV--GVSLL-----P-LFLI---HMYFARRKNERALLNDVAGVLFFCSGGFA---SCWLGMGTLDGWAWFIF--------------LQSALFFIGSSFY--------VKSVIRERKNRAFAYWSWGYHLL--------LPFLSALFGAGWAFLAFIPSSLRAWFFHGRDWPVKTIGILEIVNACFFLAVMCLFITR---------------------------------------------------------- 3MAJ Chain:A ((13-381)) GTTVLTEAQRIDWMRLIRAENVGPRTFRSLINHFGSARAALERLPELARRGGAARAGRIPSEDEARREIEAGRRIGVELVAPGETGYPTRLATIDDAPPLLGVHALPEALAVMARPMIAIVGSRNASGAGLKFAGQLAADLGAAGFVVISGLARGIDQAAHRASLSSGTVAVLAGGHDKIYPAEHEDLLLDIIQTRGAAISEMPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAADQGREVFA-VPGSPLDPRAAGTNDLIKQ-GATLITSASDIVEAVASILEGEPDTGDRTRILALLGPSPVGIDDLIRLSGISPAVVRTILLELELAGRLERHGGSLVSL

General information: TITO was launched using: RESULT: Template: 3MAJ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1239 -132024 -106.56 -557.06 target 2D structure prediction score : 0.35 Monomeric hydrophicity matching model chain A : 0.60 3D Compatibility (PKB) : -106.56 2D Compatibility (Sec. Struct. Predict.) : 0.35 1D Compatibility (Hydrophobicity) : 0.60 QMean score : 0.153

(partial model without unconserved sides chains): PDB file : Tito_3MAJ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3MAJ-query.scw PDB file : Tito_Scwrl_3MAJ.pdb: