Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLAILGFVMMIVFMYLIMSNRLSALIALIVVPIVFALISGFGKDLGEMMIQGVTDLAPTGIMLLFAILYFGIMIDSGLFDPLIAKILSFVKGDPLKIAVGTAVLTMTISLDGDGTTTYMITIAAMLPLYKRLGMNRLV-----LAGIAMLGSGVM-NIIPWGGPTAR-VLASLKLDTSEVFTPLIPAMIAGILWVIAVAYILGKKERKRLGVISIDHAPSSDPEAAPLKRPALQWFNLLLTVALMAALITSLL----------PLPVLFMTAFAVALMVNYPNVKEQQKRISAHAGNALNVVSMVFAAG-IFTGILSGTKMVDAMAHSLVSLIPDAMGPHL-PLITAIVSMPFTFFMSNDAFYFGVLPIIAEAASAYGIDAAEIGRASLLGQPVHL-LSPL-VPSTYLLVGMAGVSFGDHQKFTIKWAVGTTIVMTIAALLIGIISF
4F35 Chain:D ((34-445))----LGISMLAFIAVLWLTEALHVTVTAILVPVMAVFFGIFE---TQAALNNFAN--SIIFLFLGGFALAAAMHHQGLDKVIADKVLAMAQGKMSVAVFMLFGVTALLSMWISNTATAAMMLPLVLGVLSKVDADKQRSTYVFVLLGVAYSASIGGIATLVGSPPNAIAAAEVGLSFTDWMKFGLPTAMMMLPMAIAILYFLL----------------------VNWDKGK--VVTLGIFGLTVFLWIFSSPINAALGGFKSFDTLVALGAILMLSFARVVHWKEIQKTA-------DWGVLLLFGGGLCLSNVLKQTGTSVFLANALSDMVSHM-GIFVVILVVATFVVFLTEFASNTASAALLIPVFATVAEAFGMSPVLLSVLIAVAA-SCAFMLPVATPPNAIVFASGHIKQSEMMRVGLYLNIACIGLLTAIAM-------


General information:
TITO was launched using:
RESULT:

Template: 4F35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1994 -300717 -150.81 -797.66
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain D : 0.70

3D Compatibility (PKB) : -150.81
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.321

(partial model without unconserved sides chains):
PDB file : Tito_4F35.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4F35-query.scw
PDB file : Tito_Scwrl_4F35.pdb: