Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAPNEPGALSKGDGPNADGLVDRGGAHRAATGPGRIPDAGDPPPWQRAATRQSQAGHRQPPPVSHPEGRPTNPPAAADARLNRFISGASAPVTGPAAAVRTPQPDPDASLGCGDGSPAEAYASELPDLSGPTPRAPQRNPAPARPAEGGAGSRGDSAAGSSGGRSITAESRDARVQLSARRSRGPVRASMQIRRIDPWSTLKVSLLLSVALFFVWMITVAFLYLVLGGMGVWAKLNSNVGDLLNNASGSSAELVSSGTIFGGAFLIGLVNIVLMTALATIGAFVYNLITDLIGGIEVTLADRD |
| 5DM7 Chain:A ((20-95)) | -------------------------------------------------------------------------------------------------------------------------------DFSGLAKKRPEKALTEALPKTGGRNNRGRITSRFIGG----GHKRLYRIIDFKRRDKSGVNAKVAAIEYDPNRSARIALL------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5DM7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 15436 for 350 contacts (44.1/contact) +
2D Compatibility (PS) -8152 + (NN) -5935 + (LL) 9356
1D Compatibility (HY) -1600 + (ID) 1100
Total energy: 8005.0 ( 22.87 by residue)
QMean score : 0.456
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