Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MRILVVDNYDSFVFNLVQYLGQLGIEAEVWRNDDHRLSDEAAVAGQFDGVLLSPGPGTP---ERAGASVSIVHACAAAHTPLLGVCLGHQAIGVAFGATVDRAPELLHGKTSSVF---HTNVGVLQGLPDP--FTATRYHSLTILPKSLPAVLRVTART-SSGVIMAVQHTGLPIHGVQFHPESILTEGGHRILANWLTCCGWTQDDTLVRRLENEVLTAISPHFPTSTASAGEATGRTSA
1QDL Chain:B ((1-195))
MDLTLIIDNYDSFVYNIAQIVGELGSYPIVIRNDE--ISIKGIERIDPDRLIISPGPGTPEKREDIGVSLDVIKYLGK-RTPILGVCLGHQAIGYAFGAKIRRARKVFHGKISNIILVNNSPLSLYYGIA--KEFKATRYHSLVVD--EVHRPLIVDAISAEDNEIMAIHHEEYPIYGVQFHPESVGTSLGYKILYNFLNRV----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1QDL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159758 for 1652 contacts (-96.7/contact) +
2D Compatibility (PS) -19774 + (NN) -2731 + (LL) 2120
1D Compatibility (HY) -18800 + (ID) 4200
Total energy: -203143.0 ( -122.97 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_1QDL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QDL-query.scw
PDB file :
Tito_Scwrl_1QDL.pdb
: