Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYSEVELLSRAHQLFAGDSRRPGLDAGTTPYGDLLSRAADLNVGAGQRRYQLAVDHSRAALLSAARTDAAAGAVITGAQRDRAWARRSTGTVLDEARSDTTVTAVMPIAQREAIRRRVARLRAQRAHVL-TARRRARRHLAALRALRYRVAHGPGVALAKLRLPSPSGR--AGIAVHAALSRLGRPYVWG---ATGPNQ----------FDCSGLVQWAYAQAGVHLDRTTYQQINEGIPVPRSQVRPGDLVFPHPG---HVQLAIGNNLVVEAPHAGASVRVSSLGNNVQIRRPLSGR |
3PBC Chain:A ((285-457)) | -----------------------------------------------------------------------------------------------------------------AVVNQVLGISATSAQVTANMGRKFLEQLGILQPTDTGITNAP-AGSAQGRIPRVYGRQASEYVIRRGMSQIGVPYSWGGGNAAGPSKGIDSGAGTVGFDCSGLVLYSFAGVGIKLPHYSGSQYNLGRKIPSSQMRRGDVIFYGPNGSQHVTIYLGNGQMLEAPDVGLKVRVAPV------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PBC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57214 for 1092 contacts (-52.4/contact) +
2D Compatibility (PS) -16201 + (NN) -5909 + (LL) 7776
1D Compatibility (HY) -10400 + (ID) 2750
Total energy: -84698.0 ( -77.56 by residue)
QMean score : 0.436
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