Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----MADPGPFVADLRAESDDLDALVAHLPADRWADPTPAPGWTIAHQIGHLLWTDRVALTAVTDEAGFAELMTAAAANPAGFVDDAATELAAVSPAELLTDWRVTRGRLHEELLAVPDGRKLAWF----GPPMSAASMATARLMETWAHGLDVADALGVIRPATQRLRSIAHLGVRTRDYAFIVNNLTPPAEPFLVELRGPSGDTWSWGPSDAAQRVTGSAEDFCFLVTQRRALSTLDVNAVGEDAQRWLTIAQAFAGPPGRGR
2NSF Chain:A ((21-260))MTTFHDLPLEERLTLARLGTSHYSRQLSLVDNAEFGEHSLLEGWTRSHLIAHVAYNAIALCNLMHWANTGEE---TPMYVSPEARNEEIAYGSTLNPDALRNLHEHSVARLDVAWRETSEDAWSHEVLTAQGRTVPASETLWMRSREVWIHAVDLGAVATFGDIPEVILRTLAAEITQKWTS--------QGAGEGLVLLDEPSSTRYPAAPGQDEVVVSGSLAGIVRYAAGRGSDGVTSSTGEVPEPPRW---------------


General information:
TITO was launched using:
RESULT:

Template: 2NSF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58018 for 1811 contacts (-32.0/contact) +
2D Compatibility (PS) -24873 + (NN) -16803 + (LL) 1696
1D Compatibility (HY) 800 + (ID) 1750
Total energy: -98948.0 ( -54.64 by residue)
QMean score : 0.371

(partial model without unconserved sides chains):
PDB file : Tito_2NSF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NSF-query.scw
PDB file : Tito_Scwrl_2NSF.pdb: