Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSLVRPDLPVRIGVQLQPQHAPHYRAVRDAVRRCEDIGVDIAFTWDHFFPLYGDPDGPHFECWTVLGAWAEQTSHIEIGALVTCNSYR-NPELLADMARTVDHISGGRLILGIGSGWKQKDYDEYGYRFGTAGSRLDDLAAALPRIKARL-----------------GKLNPPPTRDIPVLIGGGGERKTLRLVAEYADIWHSFTAGDSYLAK--SAVLSTHCSTVGRNPATIERSAAVDGG---GLIASAEALAGLGVTLLTVGCDGPDYDLSAAAALCRWRDGR------------------------------------------------------- |
| 1RHC Chain:A ((1-330)) | --------MKTQIGYFASLEQYR-PMDALEQAIRAEKVGFDSVWVDDHFHP-WYHDNAQSAQAWAWMGAALQATKKVFISTCITCPIMRYNPAIVAQTFATLRQMYPGRVGVAVGAGEAMNEVPVTG-EWPSVPVRQDMTVEAVKVMRMLWESDKPVTFKGDYFTLDKAFLYTKPDDEVPLYFSGMG-PKGAKLAGMYGDHLMTVAAAPSTLKNVTIPKFEEGAREAGKDPSKMEHAMLIWYSVDPDYDKAVEALRFWAGCLVPSMFKYKVYDPKEVQLHANLVHCDTIKENYMCATDAEEMIKEIERFKEAGINHFCLGNSSPDVNFGIDIFKEVIPAVRD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119648 for 2025 contacts (-59.1/contact) +
2D Compatibility (PS) -27900 + (NN) -18026 + (LL) 900
1D Compatibility (HY) -7600 + (ID) 2550
Total energy: -174824.0 ( -86.33 by residue)
QMean score : 0.426
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