Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MLELAILGLLIESPMHGYELRKRLTGLLGAFRAFSYGSLYPALRRMQADGLIAENAAPAGTPVRRARRVYQLTDKGRRRFGELVADTGPHNYTDDGFGVHLAFFNRTPAEARMRILEGRRRQVEERREGLREAVARAS--SSFDRYTRQLHQLGLESSEREVKWLNELIAAERAAPNPAEQT
3L9F Chain:A ((35-204))
MQGKDIILGILSKKERSGYEINDILQNQLSYFYDGTYGMIYPTLRKLEKDGKITKEVVIQDG--RPNKNIYAITESGKKELASYLQSDVNDEIFKSDFLMRLFFGNSLNDDDLEQLIREEIERKEEKIKRLSENLEIWKKKGELTPTQEITIKYGLAQYKSTKKVLEEELAK-----------
General information:
TITO was launched using:
RESULT:
Template:
3L9F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63603 for 1016 contacts (-62.6/contact) +
2D Compatibility (PS) -18197 + (NN) -6538 + (LL) 604
1D Compatibility (HY) -8400 + (ID) 1850
Total energy: -97984.0 ( -96.44 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_3L9F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3L9F-query.scw
PDB file :
Tito_Scwrl_3L9F.pdb
: