Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETREGEKRTVIEVEVDEIGPSLRYATAKVNKASRSGGFGSGSRPAPAQTSSASGDDPWGSAPASGSFGGGDDEPPF
1UE1 Chain:B ((2-123))
-AGDTTITIVGNLTADPELRFTPSGAAVANFTVASTPRIYDRQTGEWKDGEALFLRCNIWREAAENVAESLTRGARVIVSGRLKQRSFETR---KRTVIEVEVDEIGPSLRYATAKVNKASRS-----------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1UE1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53909 for 717 contacts (-75.2/contact) +
2D Compatibility (PS) -13043 + (NN) -5388 + (LL) -1196
1D Compatibility (HY) -13200 + (ID) 5800
Total energy: -92536.0 ( -129.06 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_1UE1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UE1-query.scw
PDB file :
Tito_Scwrl_1UE1.pdb
: