Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCADAQPSGSVGLLGRNCPTATTRWRRAGEGLTAADTIEVKL-----WAGKPRLHPLVPK-----------------RAVGVLLAVAHGQVAKTPSATRAIAFRHV-----------RLMRVRWICAGNRGRKHKRRCT--TQYRSTQ-----ASKLQLHFKLRQ-----------TLNRLGGLQAMVSACG------------- |
| 3J6V Chain:J ((1-201)) | ----MAVRAVFGALGRRLWQGSKNFSVSSSRSNIAKNDGFLLSTSMKWVQFSNLHVDVPKDLTKPTITISDEPDTLYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISVKVHEPPRKIERFTLLKSVHIFKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTRLEQLPEHIKKPVWETTPEEKGDSKS |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J6V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3869 for 736 contacts (-5.3/contact) +
2D Compatibility (PS) -14371 + (NN) -3202 + (LL) 332
1D Compatibility (HY) -6400 + (ID) 1400
Total energy: -28910.0 ( -39.28 by residue)
QMean score : 0.172
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