Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDECVVDAAAVVDALAGKGASAIVLRGLLKESISNAPHLLD---AEVGHALRRAVLSDEISEEQARAALDALPYLIDNRYPHSPRLI---EYTWQLRHNVTFYDALYVALATALDVPLLTGDSRLAAAPGLPCEIKLVR
2FE1 Chain:A ((27-147))
--ELVVDASAIAALYVPEERSEQAERAV---SQAQELHTLDLAAYEVANDLWKHARRGLLREDEASNMLEELWEFFKALKVHSYAEVLKDAFALALKHGVTVYDAAYVALAEKIGGKLLTLDRQLA-------------
General information:
TITO was launched using:
RESULT:
Template:
2FE1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74985 for 798 contacts (-94.0/contact) +
2D Compatibility (PS) -12690 + (NN) -9445 + (LL) 1384
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: -103686.0 ( -129.93 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_2FE1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FE1-query.scw
PDB file :
Tito_Scwrl_2FE1.pdb
: