Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKWTAADIPDQTGRTAVITGANTGLGFETAAALAAHGAHVVLAVRNLDKGKQAAARITEATPGAEVELQELDLTSLASVRAAAAQLKSDHQRIDLLINNAGVMYTPRQTTADGFEMQFGTNHLGHFALTGLLIDRLLPVAGSRVVTISSVGHRIRAAIHFDDLQWE-RRYRRVAAYGQAKLANLLFTYELQRRLAPG-GTTIAVASHPGVSNTEVVRNMPRPLVAVAAILAPLMQDAELGALPTLRAATDPAVRGGQYFGPDGFGEIRGYPKVVASSAQSHDEQLQRRLWAVSEELTGVVYPVG |
| 3RD5 Chain:A ((4-290)) | -TGWTAADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGV----SGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLT----DRVVTVSSMAHWP-GRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNL------------------ATDADFGARQTLYAASQDL-PGDSFVGPRFGY--LGRTQPVGRSRRAKDAGMAAALWALSEQLTKTEFP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RD5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122643 for 2416 contacts (-50.8/contact) +
2D Compatibility (PS) -29357 + (NN) -16878 + (LL) 2860
1D Compatibility (HY) -18800 + (ID) 6700
Total energy: -191518.0 ( -79.27 by residue)
QMean score : 0.531
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