Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSPGSRRASPQSAREVVELDRDEAMRLLASVDHGRVVFTRAALPAIRPVNHLVVDGRVIGRTRLTAKVSVAVRSSADAGVVVAYEADDLDPRRRTGWSVVVTGLATEVSDPEQVARYQRL-LHPWVNMAMDTVVAIEPEIVTGIRIVADSRTP
3FKH Chain:A ((9-126))
------------------LNEQEALERLQSVSLGRVVVRRSDEMDIFPVNFIVDKGAIYIRTAE-------------LNHDVLFEADEV--KDGKAWSVVVRATAEIVRKLDEIAYADTLELKPWIPTLKYNYVRIVPNEITG----------
General information:
TITO was launched using:
RESULT:
Template:
3FKH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67506 for 721 contacts (-93.6/contact) +
2D Compatibility (PS) -11959 + (NN) -2487 + (LL) 2544
1D Compatibility (HY) -7600 + (ID) 2000
Total energy: -89008.0 ( -123.45 by residue)
QMean score : 0.512
(partial model without unconserved sides chains):
PDB file :
Tito_3FKH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FKH-query.scw
PDB file :
Tito_Scwrl_3FKH.pdb
: