Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAAPTAGGVVTSGVGVAGVGVGLLGMFGPVRVVHVGWLLPLSGVHIELDRLGGFFMALTGAVAAPVGCYLIGYVRREHLGRVPMAVVPLFVAAMLLVPAAGSVTTFLLAWELMAIASLILVLSEHARPQVRSAGLWYAVMTQLGFIAILVGLVVLAAAGGSDRFAGLGAVC------DGVRAAVFMLTLVGFGSKAGLVPLHAWLPRAHPEAPSPVSALM-SAAMVNLGIYGIVRFDLQLLGPGPRWWGLALLAVGGTSALYGVLQASVAADLKRLLAYSTTENMGLITLALGAATLFADTGAYGPASIAAAAAMLHMIAHAAFKSLAFMAAGSVLAAT-GLRDLDLLGGLARRMPATTVFFGVAALGACGLPLGAGFVSEWLLVQSLIHAAPGHDPIVALTTPLAVGVVALATGLSVAAMTKAFGIGFLARPRSTQAEAAREAPASMRAGMAIAAGACLVLAVA--PLLVAPMVRRAAATLPAAQAVKFTGLGAVVRLPAMSGSIAPGVIAAAVLAAALAV-AVLARWRFRRRPAPARLPLWACGAADL-----TVRMQYTATSFAEPLQRVFGDVLRPDTDIEVTHTAESRYMAERITYRTAVADAIEQRLYTPVVGAVAAMAELLRRAHTGSVHRYLAYGALGVLIVLVVAR |
| 4HE8 Chain:L ((55-605)) | ---------------------------------FQAEWLP-GIPFSLLLDNLSGFMLLIVTGVGFLIHVYAIGYMGGDPGYSRFFAYFNLFIAMMLTLVLADSYPVMFIGWEGVGLASFLLIGFWYKNPQYADSARKAFIVNRIGDLGFMLGMAILWALYGTLSISELKEAMEGPLKNPDLLALAGLLLFLGAVGKSAQIPLMVWLPDAMA-GPTPVSALIHAATMVTAGVYLIARSSFLYSVL--PDVSYAIAVVGLLTAAYGALSAFGQTDIKKIVAYSTISQLGYMFLAAGVGAY--------------WVALFHVFTHAFFKALLFLASGSVIHALGGEQDVRKMGGLWKHLPQTRWHALIGALALGGLPLLSGFWSKDAILAATLTYPFGG-------V-GFYVGALLVAVLTAMYAMRWFVLVFLGEERGHHH--PHEAPPVMLWPNHLLALGSVLAGYLALPHPLPNVLEPFLKPALAE-V-EAHHLS---LGA----EWGLIALSAAVA--LLGLWAGFVFF---Q---RKVFPAWYLAFEAASREAFYVDRAY-NALIVNPLKALAEALFYGDRG------------------------L-L-SGYFGLGGAARSLGQGLARLQTGYLRVYALLFVLGALLLLGVMR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -493509 for 4629 contacts (-106.6/contact) +
2D Compatibility (PS) -56246 + (NN) -28317 + (LL) 6948
1D Compatibility (HY) -36800 + (ID) 7200
Total energy: -615124.0 ( -132.88 by residue)
QMean score : 0.330
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