Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYLAGAAQIGGVMVGAPLVIGMTRQVRARWEGRAGA------GLLQPWRDLLKQLGKQQITPA-GTTIVFAAAPVIVAGTTLLIAAIAPLVATGS-----PLDPSADLFAVVGLLFLGTVA------LTLAGIDTGTSFGGMGASREITIAALVEPTILLAVFALSIPAGSANLGALVASTIDHPGHVVSLAGVLAFVALVIVIVAETGRLPVDNPATHLELTMVHEAMVLEYAGPRLALVEWAAGMRLTVLLALLANLFLPWGIAGAAPTALDVLTGVVAVAAKVAILAVLLATFEVFLAKLRLFRVPELLAGSFLLALLAVTAANFFTVGA |
| 4HEA Chain:H ((34-264)) | ----------------------IERRLLARFQVRMGPNRVGPFGLLQPLADAIKSIFKEDIVVAQADRFLFVLAPLISVVFALLAFGLIPFGPPGSFFGYQPWVINLDL----GILYLFAVSELAVYGIFLSGWASGSKYSLLGSLRSSASLISYELGLGLALLAPVLLVGSLNLNDIVNWQKEH-GWLF-LYAFPAFLVYLIASMAEAARTPFDLPEAEQELVGGYHT---EYSSIKWALFQMAEYIHFITASALIPTLFL------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -38884 for 1184 contacts (-32.8/contact) +
2D Compatibility (PS) -22015 + (NN) 510 + (LL) 10100
1D Compatibility (HY) 9200 + (ID) 800
Total energy: -41889.0 ( -35.38 by residue)
QMean score : -0.127
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