Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVTVGVICAIPQELAYLRGVLVDAKRQQVAQILFDSGQLDAHRVVLAAAGMGKVNTGLTATLLADRFGCRTIVFTGVAGGLDPELCIGDIVIADRVVQHDFGLLTDERLRPYQPGHIPFIEPTERLGYPVDPAVIDRVKHRLDGFTLAPLSTAAGGGGRQPRIYYGTILTGDQYLHCERTRNRLHHEL-GGMAVEMEGGAVAQICASFDIPWLVIRALSDLAGADSGVDFNRFVGEVAASSARVLLRLLPVLTAC
4G41 Chain:A ((4-235))
GSMKIGIIAAMEEELSLLLANLLDAQEHQVLSKTYYTGRFGKHELILVQSGVGKVMSAMTVAILVEHFKAQAIINTGSAGAVASHLAIGDVVVADRLVYHDVDATAFG----YAYGQMAGQP----LYYDCDPQFVAIFKQVLK--------------HEKTNGQVGLIATGDSFVAGQDKIDQIKTAFSNVLAVEMEGAAIAQAAHTAGKPFIVVRAMSDTAAHDANITFDQFIIEAGKRSAQILMTFLENLP--
General information:
TITO was launched using:
RESULT:
Template:
4G41.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -220611 for 1986 contacts (-111.1/contact) +
2D Compatibility (PS) -24003 + (NN) -3576 + (LL) 716
1D Compatibility (HY) -17200 + (ID) 3750
Total energy: -268424.0 ( -135.16 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_4G41.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4G41-query.scw
PDB file :
Tito_Scwrl_4G41.pdb
: