Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYLPVSTRRIWVNPLCHFSFTVISGALFVSARRYDSNMLANSREELVEV-----FDALDADLDRLDEV---------------SFEVLSTPERLRSLERLECLARRLPAAQHTLINQLDTQASEEELGGTLCCALANRLRITKPEAGRRSAEAKP |
1LVG Chain:A ((65-161)) | -----------------------IAAGDFIEHAEFSGNLYGTSKEAVRAVQAMNRICVLDVDLQGVRSIKKTDLCPIYIFVQPPSLDVLEQRLRLRNTETEESLAKRLAAA------RTDMESSKE------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LVG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8292 for 417 contacts (19.9/contact) +
2D Compatibility (PS) -8071 + (NN) -1237 + (LL) 4236
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -3330.0 ( -7.99 by residue)
QMean score : 0.060
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