Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLKVKGEGLGAQVTGVD-PKNLDDITTDEIRDIVYTNKLVVLKDVHPSPREFIKLGRIIGQIVPYYEPMY-HHEDHPEIFVSSTEEGQGVPKTGAFWHIDYMFMPEPFAFSMVLPLAVPGHDRGTYFIDLARVWQSLPAAKRDPARGTVSTHDPRRHIKIRPSDVYRPIGEV---WDEINRTTPPIKWPTVIRHPKTGQEILYICATGTTKIEDKDGNPVDPEVLQELMAATGQLDPEYQSPFIHTQHYQVGDIILWDNRVLMHRAKHGSAAGTLTTYRLTMLDGLKTPGYAA |
| 1GY9 Chain:A ((11-274)) | ------GPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQQQRALAQRFGEL--HIHPVYPHAEGVDEIIVLDTHNDN--PPDNDNWHTDVTFIETPPAGAILAAKELPSTGGDTLWTSGIAAYEALSVPFRQLLSGLRAEHDFRKSF---PEYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEK--ESEALLSFLFA-HITKPEFQVRW----RWQPNDIAIWDNRVTQHYANADYLPQRRIMHRATIL---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1GY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -125370 for 2109 contacts (-59.4/contact) +
2D Compatibility (PS) -27871 + (NN) -12968 + (LL) 1832
1D Compatibility (HY) -6000 + (ID) 3750
Total energy: -174127.0 ( -82.56 by residue)
QMean score : 0.526
|
|
|