Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPVTTFPLVDAIL--AGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAVAGA------------------------------------MLDASADVIGI-EQTSAGYAKIVGC----ALGFPVINIARSSAKLLYESPIIA-ARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCM-------TPI-DLPNAIGGYDVIIGATGAT-SVPASMHELLRPGVLLMSASSSDREFDAVALRRRT-T-PNPDCHADLRVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIVASFLNIDVPLQALSRLPLLSIDGYRRLQVRSGYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAYGVARTRLMHAGASESLMV |
| 3D64 Chain:A ((54-460)) | ---ETEMPGLVQIRDEYKAQQPLKGARIAGSLHMTIQTGVLIETLKALGADVRWAS--CNIFSTQDHAAAAIVEAGTPVFA----F--KGESLDEYWEFSHRIFEWP------NGEFANMILDDGGDATLLLILGSKAEKDRSVIARPTNEEEVALFKSIERHLEIDGSWYSKRLAHIKGVTEETTTGVHRLYQMEKDGRLPFPAFNVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQAAMEGYRVVTMEYAADKADIFVTATGNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVASTRQYQWENIKPQVDHIIF--PDGKRVILLAEGRLVNLGCATGHPSFVMSNSFTNQTLAQIELFTR-GGEYANKVYVLPKHLDEKVARLH------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3D64.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -234269 for 3124 contacts (-75.0/contact) +
2D Compatibility (PS) -38293 + (NN) -18764 + (LL) 11580
1D Compatibility (HY) -7200 + (ID) 3300
Total energy: -290246.0 ( -92.91 by residue)
QMean score : 0.389
|
|
|