Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTPVILVAGQDHT--DEVTGALLR-R--TGTVVVEHRFDG-HVVRRMTATLSRGELITTEDALEFAHGCVSCTIRDDLLVLLRRLHRR-----DNVGRIVVHLAPWLEPQPICWAIDHVRVCVGHGYPDGPAALDVRVAAVVTCVDCVRWLPQSLGEDELPDGRTVAQVTVGQAEFADLLVLTHPE--P--V-AVAVLRRLAPRARITG-GVDRVE-L---ALAHLDDNSRRGRTDTPHTPLLAGLPPLAADGEVAIVEFSARRPFHPQRLHAAVDLL----LDGVVRTRGRLWLANRPDQVMWLESAGGGLRVASAGKWLAAMAASEVAYVDLERRLFADLMWVYPFGDRHTAMTVLVCGADPTDIVNALNAALLSDDEMASPQRWQSYVDPFGDWHDDPCHEMPDAAGEFSAHRNSGESR |
| 1NIJ Chain:A ((2-317)) | NPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDR-------ATQIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMADPGPIIQTFFSHE----------VLCQRYLLDGVIALVDAVHADEQMNQ----------FTIAQSQVGYADRILLTKTDVAGEAEKLHERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEENVVST----KPRF--HFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEP-NRLLFQGVQRLYSADWDRPWGD--------------------------EKPHSTMVFIGIQLPEEEIRAAFAGLR----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NIJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -209692 for 2301 contacts (-91.1/contact) +
2D Compatibility (PS) -31650 + (NN) -14281 + (LL) 4568
1D Compatibility (HY) -12000 + (ID) 2400
Total energy: -265455.0 ( -115.37 by residue)
QMean score : 0.344
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