Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRTFESVADLAAAAGEKVGQSDWVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLGNGT-VQATVSTTVEVE-GSAKPACVAESIVRYVA
2C2I Chain:A ((2-150))
-RTFESVADLAAAAGEKVGQSDWVTITQEEVNLFADATGDHQWIHVDPERAAAGPFGTTIAHGFMTLALLPRLQHQMYTVKGVKLAINYGLNKVRFPAPVPVGSRVRATSSLVGVEDLG-NGTVQATVSTTVEVEGSA-KPACVAESIVRYV-
General information:
TITO was launched using:
RESULT:
Template:
2C2I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42383 for 1074 contacts (-39.5/contact) +
2D Compatibility (PS) -16092 + (NN) -5512 + (LL) 364
1D Compatibility (HY) -3200 + (ID) 3600
Total energy: -70423.0 ( -65.57 by residue)
QMean score : 0.302
(partial model without unconserved sides chains):
PDB file :
Tito_2C2I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C2I-query.scw
PDB file :
Tito_Scwrl_2C2I.pdb
: