Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTGISRRTFGLAAGFGAIGAGGLGGGCSTRSGPTPTPEPASRGVGVVLSHEQFRTDRLVAHAQAAEQAGFRYVWASDHLQPWQDNEGHSMFPWLTLALVGNSTSSILFGTGVTCPIYRYHPATVAQAFASLAILNPGRVFLGLGTGERLNEQAA--TDTFGNYRERHDRLIEAIVLIRQLWSGERISFTGHYFRTDELKLYDTPAMPPPIFVAASGPQSATLAGRYGDGWIA---QARDINDAKLLAAFAAGAQAAGRDPTTLGKRAEL-FAVVGDDKAAARAADLWRFTAGAVDQP----NPVEIQRAAESNPIEKVLANWAVGTDPGVHIGAVQAVLDAGAVPFL-HFPQDDPITAIDFYRTNVLPELR |
3B4Y Chain:A ((23-353)) | ----------------------------------------ELKLGYKASAEQFAPRELVELAVAAEAHGMDSATVSDHFQPWRHQGGHAPFSLSWMTAVGERTNRLLLGTSVLTPTFRYNPAVIAQAFATMGCLYPNRVFLGVGTGEALNEIATGYEGAWPEFKERFARLRESVGLMRQLWSGDRVDFDGDYYRLKGASIYDVPDGGVPVYIAAGGPAVAKYAGRAGDGFICTSGKGEELYTEKLMPAVREGAAAADRSVDGIDKMIEIKISYDPDPELAMNNTRFWAPLSLTAEQKHSIDDPIEMEKAADALPIEQIAKRWIVASDPDEAVEKVGQYVTWGLNHLVFHAPGHDQRRFLELFQSDLAPRLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B4Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177324 for 2721 contacts (-65.2/contact) +
2D Compatibility (PS) -34656 + (NN) -16788 + (LL) 136
1D Compatibility (HY) -20400 + (ID) 5950
Total energy: -254982.0 ( -93.71 by residue)
QMean score : 0.500
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