Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIALPALEGVEHRHVDVAEGVRIHVADAGPADGPAVMLVHGFPQNWWEWRDLIGPLAADGNRVLCPDLRGAGWSSAPR--SRYTKTEMADDLAAVLDGLGVAKVKLVAHDWGGPVAFIMMLRHPEKVTGFFGVNTVAPWVKRD-----LGMLRNMWRFWYQIPMSLPVIGPRVISDPKGRYFRLL------TGWVG-------GGFRV--PDD----------DVRLYLDCMREPGHAEAGSRWYRTFQTREMLRWLRGEYNDARVDVPVRWLHGTGDPVITPDLLDGYAERASDFEVELVDGVGHWIVEQRPELVLDRVRAFLAAGTEQRD |
| 1CQZ Chain:A ((235-533)) | ---------VSHGYVTVKPGIRLHFVEMG--SGPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPEIEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNT--PFMPPDPDVSPMKVIRSIPVFNYQLYFQEPGVAEAELEKNMSRTFKSFFRASDETGFIAVHKATEIGGILVNTPEDPNLSKITTEEEIEFYIQQFKKTGF-RGPLNWYRN--TERNWKW-SCKGLGRKILVPALMVTAEKDIVLRPEMSKNMEKWIPFLKRGHIEDCGHWTQIEKPTEV---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1CQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -170293 for 2198 contacts (-77.5/contact) +
2D Compatibility (PS) -28548 + (NN) -15021 + (LL) 3116
1D Compatibility (HY) -20800 + (ID) 4050
Total energy: -235596.0 ( -107.19 by residue)
QMean score : 0.479
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