Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAPGDWSVFAWHAANLPTMPEAEDIGNEAAGGRFGVSIRSAGYLRKWFLLGITIGVIAGLGAVVFYLALKYTSEFLLGYLADYQIPTPVGEGGHRGSTGFARPWAIPLVTTGGAVLSALIVAKLAPEATGHGTDEAIESVHGDPRAIRGRAVL-VKMVASALTIGSGGSGGREGPTAQISAGFCSLLTRRLNLSNEDGR-TAVALGIGAGIGAIFAAPLGGAALGASIPYRDDFDY-----RNLLPGFIASGTAYAVLGAFLGFDPLFGYIDAEYRFEKAWPLLW-FVVIGLIAAAVGYLYARVFHASVAITRRLPGGPVLK-----PAIGGLLVGLLGLPIPQILSSGYGWAQLAADRGTLLSIPLWIVIVLPIAKILATSLSIGTGGSGGLFGPGIVIGAFVGAAIWRLGELTELPGVPHEPGIFVVVAMMACFGSVSRAPLAVMIMVAEMTGSFS-VVPGAIIAVGIAALLLSRTNVTIYET---QRLNRQTAEAERGGSDRPTTA |
| 1KPL Chain:A ((90-460)) | -----------------------------------------------------------------------------------------------------------------AMVGYFLVRKFAPEAGGSGIPE-IEGALEELRPVRWWRVLPVKFIGGMGTLGAGMVLGREGPTVQIGGNLGRMVLDVFRMRSAEARHTLLATGAAAGLSAAFNAPLAGILFIIE-EMRPQFRYNLISIKAVFTGVIMSSIVFRI---FNGEAPI---IEVGKLSDAPVNTLWLYLILGIIFGVVGPVFNSLVLRTQDMFQRFHGGEIKKWVLMGGAIGGL-CGILGLIEPAAAGGGFNLIPIAAAGNFSVGLLLFIFI----TRVVTTLLCFSSGAPGGIFAPMLALGTLLGTA-FGMAAAVLFPQYHLEAGTFAIAGMGALMAASVRAPLTGIVLVLEMTDNYQLILPMIITCLGATLLAQFLGGKPLYSTILARTLAKQDAEQ----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KPL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -256608 for 3274 contacts (-78.4/contact) +
2D Compatibility (PS) -36983 + (NN) -14773 + (LL) 7456
1D Compatibility (HY) -29200 + (ID) 5550
Total energy: -335658.0 ( -102.52 by residue)
QMean score : 0.316
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