Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRCRPPSRNRSAHTARNTRPCSLKSRRFTVRFHQTLAAAANSYADAEAAIASTRQNQLAVPAAAPTPAAAAMIPPFPANLTTLFFGPTGIPLPP----------PSMLTPPIRCRS-----VRRALQAVFTPEELY-PLTGVRSLVLNTSVEEGLTILHDAIMVELA-TTGNAVTVFGWSQSAIIASLEMQRFTAMGGAAPSASDLN-FVLVGNEMNPNGGMLARFP-----DL-----TLPT---LDLTFYGATPSD---TIYPTAIYTLEYDGFADFSRYPLN---FISDLNAVA-GITFVHTKYLDLTPAQVEGATKLPTSPGYTGVTDYYIIRTENRPLLQPLRAVPVIGDPLADLIQPNLKVIVNLGYGDPNYGYSTSYADVRTPFGLWPNVPPQVIADALAAGTQEGILDFTADLQALSAQPLTLPQIQLPQPADLVAAVAAAPTPAEVVNTLARIISTNYAVLLPTVDIALALVTTLPLYTTQLFVRQLAAGNLINAIGYPLAATVGLGTIDSGRRGIAHPPRGGLGHRSKHRGPRHLTDSRRHRRPPTTVYRPRQ |
| 3AJA Chain:A ((72-306)) | ---------------------------------------------------------------------------DCPDVMMVSIPGTWESSPTDDPFNPTQFPLSLMSNISKPLAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRG-PVDEDLVLGVTLIADGRRQMGVGQDVGPNPAGQGAEITLHEVPALSALGLTMTGPRPGGFGALDNRTNQICGSGDLICSAPEQAFSVFNLPKTLETLSG---PVHALYNTP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3AJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -98993 for 1537 contacts (-64.4/contact) +
2D Compatibility (PS) -21124 + (NN) -12129 + (LL) 19536
1D Compatibility (HY) 2400 + (ID) 1600
Total energy: -111910.0 ( -72.81 by residue)
QMean score : 0.279
|
|
|