Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGREYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPE----------YVTDINKAFIQTLFPGAVSQGLFT-PEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQLAL--DNKVVAFGYSQSATIINNYINSLMA-MGSPNPDDISFVMI--------------GSGNNPVGGLLARFPGFYIPFLDVPFNGATPANSPY---PTHIYTAQYDGIAHAPQFPLRILSDINAFMGY--------------FYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVTLLSLMSGGLGNILHLIPPPVFT |
| 3AJA Chain:A ((71-334)) | ---------------------------------------------------------------------------------------------------------------------------------------ADCPDVMMVSIPGTWESSPTDDPFNPTQFPLSLMSNISKPLAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAEGMRTTVKAMTDMNDRCPLTSYVIAGFSQGAVIAGDIASDIGNGRGPVDEDLVLGVTLIADGRRQMGVGQDVGPNPAGQGAEITLHEVPALSALGLTMTGPRPGGFGALDNRTNQICGSGDLICSAPEQAFSVFNLPKTLETLSGPVHALYNTPQFWVENGQTATQWTLEWARNLVENAPHP-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AJA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112977 for 1699 contacts (-66.5/contact) +
2D Compatibility (PS) -23462 + (NN) -20257 + (LL) 16168
1D Compatibility (HY) 400 + (ID) 1850
Total energy: -141978.0 ( -83.57 by residue)
QMean score : 0.322
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