Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTSLVSAVGSHHVTTDPDVLAGRSVDHTGRYRGRASALVRPGSAEEVAEVLRVCRDAGAYVTVQGGRTSLVAGTVPEHDDVLLSTERLCVVSDVDTVERRIEIGAGVTLAAVQHAASTAGLVFGVDLSARDTATVGGMASTNAGGLRTVRYGNMGEQVVGLDVALPDGTVLRRHSRVRRDNTGYDLPALFVGAEGTLGVITALDLRLHPTPSHRVTAVCGFAELAALVDAGRMFRDVEGIAA-----LELIDGRAAALTREHLGVRPPVEA--DWLLLVELAADHDQTDRLADLLGGARMCGEPAVGVDAA------AQQRLWRTRESLAEVLGVYGPPLKFDVSLPLSAISGFARDAVALVHRHVPDSPEALPLLFGHIGEGNLHLNVLRCPPDREPALYAK-------MMGLIAECGGNVSSEHGVGSRKRAYLGMSRQANDVAAMRRVKAALDPTGYLNAAVLFD |
| 3PM9 Chain:A ((17-471)) | LIARFTAIVGDKHALTDPLELEAYITEERNLYRGHSPLVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPHNGEVVISLKRMDKIREIDTSSNTITVEAGAILQRVQEKAAEVDRLFPLSLGAQGSCTIGGNLSTNAGGTAALAYGLARDMALGVEVVLADGRVMNLLSKLKKDNTGYDLRDLFIGAEGTLGIITAATLKLFPKPRAVETAFVG---LQSPDDALKLLGIAQGEAAGNLTSFELIAETPLDFSVRHANNRDPLEARYPWYVLIELSSPRD--DARAALESILERGFEDGIVVDAAIANSVQQQQAFWKLREEISPAQKPEGGSIKHDISVPVAAVPQFIEQANAAVVALIPG---ARPVPFGHLGDGNIHYNVSQPVGADKAEFLARWHDVSQVVFEVVLRLGGSISAEHGIGVMKRDELAEVKDKTAIELMRSIKALLDPHGIMN------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PM9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -269910 for 3748 contacts (-72.0/contact) +
2D Compatibility (PS) -46847 + (NN) -20073 + (LL) 1200
1D Compatibility (HY) -23600 + (ID) 7950
Total energy: -367180.0 ( -97.97 by residue)
QMean score : 0.524
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