Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSPRRKFEPGEGALLAPQSIEPSRRWGLPLALTASAVVMAAAISACALMRISHESHQRAAHKDIVMLSDVRSFMTMFTSPDPFHANEYAERVLSHATGDFAKQYHERANDILIRISGVEPTTGTVLDAGVQRWNEDGSANVLVVTQITSKSADGKRVVSNANRWLVTAKQEGNEWKISSL-LPVI----------------------------------------------------------------------------------------------------------------------------- |
| 4D2I Chain:A ((1-476)) | MIIGYVIGQATTQEALILAERPVRLGTYVVLEYDNVKALGLITNVTRGSPLLDDNMNDIEIVQRLKQFNNSIPVYTKAKVKLLCDMNNHFLMPDIPPFAGTPAREAEDEELKSIYSQDGQIRIGSLIGKNVEVKLNINSFARHLAILAATGSGKSNTVAVLSQRISELGGSVLIFDYHGEYYDSDIKNLNRIEPK----LNPLYM-TPREFSTLLEIRENAIIQYRILRR-AFIKVTNGIRAALAAGQI-------PFSTL---------NSQFYELMADA---LKDEVLNKFEEFMDRYSNVIDLTSSDIIEKVKR----GKVNVVSLTQLDEDSMDA--VVSHYLRRILDSRKDFKRSKNSGLKFPIIAVIEEAHVFLSKNENTLTKYWASRIAREGRKFGVGLTIVSQRPKGLDENILSQMTNKIILKIIEPTDKKYILESSDNLSEDLAEQLSSLDVGEAIIIGKIVKLPAVVKIDMFEGKLLGSDPDMIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42174 for 1026 contacts (-41.1/contact) +
2D Compatibility (PS) -16194 + (NN) -4809 + (LL) 1368
1D Compatibility (HY) -11200 + (ID) 1800
Total energy: -74809.0 ( -72.91 by residue)
QMean score : 0.186
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