Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLVNNDDQMEPASGFDPHPHRDMEIVTWVLRGALRHQDSAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQMWVIPDATGITASYQQQEIDDELLRAGLVTIASGIPGQDAALTLHNSSASLHGARLRPGATV-SLPCAPFLHLFVAYGRLTLEGGGELADGDAVRFTDADARGLTANEPSEVLIWEMHAKLGDSAT
1TQ5 Chain:A ((2-233))
----IYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVINDDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHSEYNPSSTERLHLYQIWIMPEENGITPRYEQRRFD--AVQGKQLVLSPD--ARDGSLKVHQDMELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTI-NGVKASTSDGLAIWDEQAISIHADSDSEVLLFDL---------
General information:
TITO was launched using:
RESULT:
Template:
1TQ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59384 for 1768 contacts (-33.6/contact) +
2D Compatibility (PS) -24060 + (NN) -4223 + (LL) 1000
1D Compatibility (HY) -16000 + (ID) 4100
Total energy: -106767.0 ( -60.39 by residue)
QMean score : 0.308
(partial model without unconserved sides chains):
PDB file :
Tito_1TQ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TQ5-query.scw
PDB file :
Tito_Scwrl_1TQ5.pdb
: