Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------MSTVHSSIDQHPDLLALRASFDRAAESTIAHFT-------FGLALLAGLYVAASPWIVGFS----ATRGLPTCDLIVGIAVAYLAY------GFASALDRTHGMTWTLPVL----------GVWVIFSPWVLPG--VAVTAGMMWSHIIAGAVVAVLGFYFG---MRTRAAANQG---- |
| 1R5I Chain:D ((3-216)) | SMKLRVENPKKAQKHFVQNLNNVVFTNKELEDIYNLSNKEETKEVLKLFKLKVNQFYRHAFGIVNDYNGLLEYKEIFNMMFLKLSVVFDTQRKEANNVEQIKRNIAILDEIMAKADNDLSYFISQNKNFQELWDKAVKLTKEMKIKLKGQKLDLRDGEVAINKVRELFGSDKNVKELWWFRSLLVKGVYLIKRYYEGDIELKTTSDFAKAVFED |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R5I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -87702 for 899 contacts (-97.6/contact) +
2D Compatibility (PS) -14918 + (NN) -1569 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -110189.0 ( -122.57 by residue)
QMean score : 0.167
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