Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTAAHGYTQQKDNYAKRLRRVEGQVRGIARMIEEDKYCIDVLTQISAVTSALRSVALNLLDEHLSHCVTRAVAEGGPGADGKLAEASAAIARLVRS
4ADZ Chain:B ((47-136))
------YHKQKAEHLKRLRRIEGQIRGLQRMVDEDVYCIDILTQVSASTKALQSFALQLLEEHLRHCVADAALKGGTEIDAKVEEATKAIGRLLRT
General information:
TITO was launched using:
RESULT:
Template:
4ADZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16915 for 466 contacts (-36.3/contact) +
2D Compatibility (PS) -10000 + (NN) -6275 + (LL) 420
1D Compatibility (HY) -8800 + (ID) 2600
Total energy: -44170.0 ( -94.79 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_4ADZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ADZ-query.scw
PDB file :
Tito_Scwrl_4ADZ.pdb
: