Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAPVNVISVAVVASDPLTRDGALARLSSHRELDVRA-WQ--------A-GCETSVLLVLATTITAP-LLCQIEDVQKDGPSHAPKLVVVADEFSAEQVFRMIKLGLTGLLYRSQSTFDCIVETIRLSAEGRLRLPERVQRYLVGRIKSTPTAEPDTPCAAALAEREVAVLRLLADGLSTHQVAVQLNYCERTIKNIVHDIVTRLKLRNRTHAVAHALRAGLI
4GVP Chain:A ((3-208))------IKVLFVDDHEMVRIGISSYLSTQSDIEVVGEGASGKEAIAKAHELKPDLILMDLL-MEDMDGVEATTQIKKDL--PQIKVLMLTSFIEDKEVYRALDAGVDSYILK-TTSAKDIADAVRKTSRGESVFEPEVL-VKMRNR-----MKKRAELYEMLTEREMEILLLIAKGYSNQEIASASHITIKTVKTHVSNILSKLEVQDRTQAVIYAFQHNLI


General information:
TITO was launched using:
RESULT:

Template: 4GVP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -185411 for 1514 contacts (-122.5/contact) +
2D Compatibility (PS) -20800 + (NN) -5038 + (LL) 472
1D Compatibility (HY) -14000 + (ID) 2100
Total energy: -226877.0 ( -149.85 by residue)
QMean score : 0.576

(partial model without unconserved sides chains):
PDB file : Tito_4GVP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GVP-query.scw
PDB file : Tito_Scwrl_4GVP.pdb: