Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQPSGLKNLLRAAAGALPVVPRTDQLPNRTVTVEELPIDPANVAAYAAVTGLRYGNQVPLTYPFALTFPSVMSLVTGFDFPFAAMGAIHTENHITQYRPIAVTDAVGVRVRAENLREHRRGLLVDLVTNVSVGNDVAWHQVTTFLHQQRTSLSGEPKPPPQKKPKLPPPAAVLRITPAKIRRYAAVGGDHNPIHTNPIAAKLFGFPTVIAHGMFTAAAVLANIEARFPDAVRYSVRFAKPVLLPATAGLYVAEGDGGWDLTLRNMAKGYPHLTATVRGL
3WEW Chain:A ((8-258))
-----------------------------RTVTVEELPIDPANVAAYAAVTGLRYGNQVPLTYPFALTFPSVMSLVTGFDFPFAAMGAIHTENHITQYRPIAVTDAVGVRVRAENLREHRRGLLVDLVTNVSVGNDVAWHQVTTFLHQQ------------------PPPAAVLRITPAKIRRYAAVGGDHNPIHTNPIAAKLFGFPTVIAHGMFTAAAVLANIEARFPDAVRYSVRFAKPVLLPATAGLYVAEGDGGWDLTLRNMAKGYPHLTATVRGL
General information:
TITO was launched using:
RESULT:
Template:
3WEW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -204202 for 1897 contacts (-107.6/contact) +
2D Compatibility (PS) -25194 + (NN) -7797 + (LL) 1544
1D Compatibility (HY) -32400 + (ID) 11650
Total energy: -279699.0 ( -147.44 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_3WEW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3WEW-query.scw
PDB file :
Tito_Scwrl_3WEW.pdb
: