Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARSQEPSRGLLDPVAKMLRLPFGTPDFIEKIVTGSVNQVGRRTLYVLITTWDAAGGGPFAASAIATTGLAKTAEIVQSMFIGPVFNPLLKMLGADKIAIRASLCAAQLVGLGIMRYGVRSEPLHSMSVEMLVDAIGPTMQRYLVGDIGRG
2GUH Chain:A ((81-213))
-----GSKEQLFDAL---VDFRAAAEIV----FSGPLDGLGERMVSMFARPLE-PYKPLSLNILFMSGPSEESSRKLRANYSAQMIDALAERLPGRDARLRAELVMSMLTGLAVMRRKMMQE-HATGTPEEVVAHYAPLVQELLDGG----
General information:
TITO was launched using:
RESULT:
Template:
2GUH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -103623 for 937 contacts (-110.6/contact) +
2D Compatibility (PS) -13772 + (NN) -621 + (LL) 1500
1D Compatibility (HY) -6400 + (ID) 1100
Total energy: -124016.0 ( -132.35 by residue)
QMean score : 0.250
(partial model without unconserved sides chains):
PDB file :
Tito_2GUH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GUH-query.scw
PDB file :
Tito_Scwrl_2GUH.pdb
: