Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHTQVHTARLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVLPIDISLDTSAELMCDWRAGDVW
1M4G Chain:A ((1-181))
MHTQVHTARLVHTADLDSETRQDIRQMVTGAFAGDFTETDWEHTLGGMHALIWHHGAIIAHAAVIQRRLIYRGNALRCGYVEGVAVRADWRGQRLVSALLDAVEQVMRGAYQLGALSSSARARRLYASRGWLPWHGPTSVLAPTGPVRTPDDDGTVFVLPIDISLDTSAELMCDWRAGDVW
General information:
TITO was launched using:
RESULT:
Template:
1M4G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139010 for 1387 contacts (-100.2/contact) +
2D Compatibility (PS) -19163 + (NN) -7687 + (LL) 0
1D Compatibility (HY) -24400 + (ID) 9050
Total energy: -199310.0 ( -143.70 by residue)
QMean score : 0.686
(partial model without unconserved sides chains):
PDB file :
Tito_1M4G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1M4G-query.scw
PDB file :
Tito_Scwrl_1M4G.pdb
: