Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSQIMYNYPAMLGHAGDMAGYAGTLQSLGAEIAVEQAALQSAWQGDTGITYQAWQAQWNQAMEDLVRAYHAMSSTHEANTMAMMARDTAEAAKWGG
2KG7 Chain:B ((602-697))
MSQIMYNYPAMLGHAGDMAGYAGTLQSLGAEIAVEQAALQSAWQGDTGITYQAWQAQWNQAMEDLVRAYHAMSSTHEANTMAMMARDTAEAAKWGG
General information:
TITO was launched using:
RESULT:
Template:
2KG7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14570 for 500 contacts (-29.1/contact) +
2D Compatibility (PS) -10222 + (NN) -1431 + (LL) 0
1D Compatibility (HY) -11200 + (ID) 4800
Total energy: -42223.0 ( -84.45 by residue)
QMean score : 0.134
(partial model without unconserved sides chains):
PDB file :
Tito_2KG7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KG7-query.scw
PDB file :
Tito_Scwrl_2KG7.pdb
: