Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVPAKKKQQQGERSRESILDATERLMATKGYAATSISDIRDACGLAPSSIYWHFGSKEGVLAAMMERGAQRFFAAIPTWDEAHGPVEQRSERQLTELVSLQSQHPDFLRLFYLLSMERSQDPAVAAVVRRVRNTAIARFRDSITHLLPSDIPPGKADLVVAELTAFAVALSDGVYFAGHLEPDTTDVERMYRRLRQALEALIPVLLEET
5D18 Chain:A ((12-210))
-----------GERSRESILDATERLMATKGYAATSISDIRDACGLAPSSIYWHFGSKEGVLAAMMERGAQRFFAAIPTWDEAHGPVEQRSERQLTELVSLQSQHPDFLRLFYLLSMERSQDPAVAAVVRRVRNTAIARFRDSITHLLPSDIPPGKADLVVAELTAFAVALSDGVYFAGHLEPDTTDVERMYRRLRQALEALIPVLLEET
General information:
TITO was launched using:
RESULT:
Template:
5D18.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106005 for 1409 contacts (-75.2/contact) +
2D Compatibility (PS) -21697 + (NN) -14342 + (LL) 784
1D Compatibility (HY) -26000 + (ID) 9950
Total energy: -177210.0 ( -125.77 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_5D18.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5D18-query.scw
PDB file :
Tito_Scwrl_5D18.pdb
: