Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLSDRDLRAEISSGRLGIDPFDDTLVQPSSIDVRLDCLFRVFNNTRYTHIDPAKQQDELTSLVQPVDGEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEHPYGSSRAGSKYQGQRGPTPSRSYQNFIRST
2QXX Chain:A ((1-189))
MLLSDRDLRAEISSGRLGIDPFDDTLVQPSSIDVRLDCLFRVFNNTRYTHIDPAKQQDELTSLVQPVDGEPFVLHPGEFVLGSTLELFTLPDNLAGRLEGKSSLGRLGLLTHSTAGFIDPGFSGHITLELSNVANLPITLWPGMKIGQLCMLRLTSPSEHPYGSSRAGSKYQGQRGPTPSRSYQNFIRS-
General information:
TITO was launched using:
RESULT:
Template:
2QXX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -81748 for 1362 contacts (-60.0/contact) +
2D Compatibility (PS) -20286 + (NN) -10506 + (LL) 52
1D Compatibility (HY) -25200 + (ID) 9450
Total energy: -147138.0 ( -108.03 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_2QXX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QXX-query.scw
PDB file :
Tito_Scwrl_2QXX.pdb
: