Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKPADHRNHAAVSTSVLSALFLGAGAALLSACSSPQHASTVPGTTPSIWTGSPAPSGLSGHDEESPGAQSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG
1PZS Chain:A ((38-208))
---------------------------------------------------------------------QSLTSTLTAPDGTKVATAKFEFANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLSAGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADNFANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIGSG
General information:
TITO was launched using:
RESULT:
Template:
1PZS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77629 for 1328 contacts (-58.5/contact) +
2D Compatibility (PS) -19411 + (NN) -19389 + (LL) 2008
1D Compatibility (HY) -17200 + (ID) 8550
Total energy: -140171.0 ( -105.55 by residue)
QMean score : 0.627
(partial model without unconserved sides chains):
PDB file :
Tito_1PZS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PZS-query.scw
PDB file :
Tito_Scwrl_1PZS.pdb
: