Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVETSQTPSAAIDSDRWPAVAKVPRGPLAAASAAIANRLLRRTATHLPLRLVYSDGTATGAADPRAPSLFIHRPDALARRIGRHGLIGFGESYMAGEWSSKELTRVLTVLAGSVDELVPRSLHWLRPITPTFRPSWPDHSRDQARRNIAVHYDLSNDLFAAFLDETMTYSCAMFTDLLAQPTPAWTELAAAQRRKIDRLLDVAGVQQGSHVLEIGTGWGELCIRAAAR-GAHIRSVTLSVEQQRLARQRVAAAGFGHRVEIDLCDYRDVDGQYDSVVSVEMIEAVGYRSWPRYFAALEQLVRPGGPVAIQAITMPHHRMLA---------TRHTQTWIQKYIFPGGLLPSTQAIIDITGQHTGLRIVDAASLRPHYAETLRLWRERFMQRRDGLAHLGFDEVFARMWELYLAYSEAGFRSGYLDVYQWTLIREGPP |
1KPG Chain:A ((5-287)) | ---------------------------------------------------------------------------------------------------------------------------------------------LKPHFANVQAHYDLSDDFFRLFLDPTQTYSCAYFERDD-------MTLQEAQIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQECASA-NGFTVTRVQSLQPHYAKTLDLWSAALQANKGQAIALQS-EEVYERYMKYLTGCAEMFRIGYIDVNQFTCQK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167615 for 2321 contacts (-72.2/contact) +
2D Compatibility (PS) -29741 + (NN) -8543 + (LL) 8428
1D Compatibility (HY) -16000 + (ID) 4350
Total energy: -217821.0 ( -93.85 by residue)
QMean score : 0.554
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