Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKRPLRWLTEQITLAGMRPPISPQLLINRPAMQPVDLTGKRILLTGASSGIGAAATKQFGLHRAVVVAVARRKDLLDAVADRITGDGGTAMSLPCDLSDMEAIDALVEDVEKRIGGIDILINNAGRSIRR-PLAESLERWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRIIETEWGSQGVHSTTLYYPLVATPMIAPTKAY-------------DGLPALTAAEAAEWMVTAARTRPVRIAPRVAVAVNALDSIGPRWVNALMQRRNEQLNP |
| 4FN4 Chain:A ((3-236)) | -----------------------------------QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEV--SDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG-GFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDE------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4FN4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -140849 for 1932 contacts (-72.9/contact) +
2D Compatibility (PS) -23324 + (NN) -7831 + (LL) 5536
1D Compatibility (HY) -12000 + (ID) 3000
Total energy: -181468.0 ( -93.93 by residue)
QMean score : 0.559
|
|
|