Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MALSIKHPEADRLARALAARTGET------LTEAVVTALRERLARETG---RARVVPLRDELAAIRHRCAALPVVDNRSAEAILGYDE-----RGLPA------------------------------------------------------------------------------------------------------------------------ |
| 4U8U Chain:M ((3-224)) | TYKDRRFQYILTNQHLFIDKLERDLHEIDDEFKKLGSDVKDQTVRHLKARISNLEGDDCKEHEAPCGGDVP----QCISDLFFCDGHKDCKNGRDEDKEVCSEVPADIGSSFAGVVSWQACEEATPHHAVVTITANERKEFFKPRIWVRAILAFEEEEHEHHIKTFQLRGYYSFGDRTLALGPERGTKPVYGVRCHFDRGDDDHADCQIVNPASLFVCGNFAAERH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4U8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6252 for 343 contacts (-18.2/contact) +
2D Compatibility (PS) -8747 + (NN) -4843 + (LL) 492
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -22650.0 ( -66.03 by residue)
QMean score : 0.435
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