Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALREFSSVKVGDQLPEKTYPLTRQDLVNYAGVSGDLNPIHWDDEIAKVVGLDTAIAHGMLTMGIGGGYVTSWVGDPGAVTEYNVRFTAVVPVPNDGKGAELVFNGRVKSVDPESKSVTIALTATTGGKKIFGRAIASAKLA
4RLT Chain:B ((6-147))
MALREFSSVKVGDQLPEKTYPLTRQDLVNYAGVSGDLNPIHWDDEIAKVVGLDTAIAHGMLTMGIGGGYVTSWVGDPGAVTEYNVRFTAVVPVPNDGKGAELVFNGRVKSVDPESKSVTIALTATTGGKKIFGRAIASAKLA
General information:
TITO was launched using:
RESULT:
Template:
4RLT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87675 for 1071 contacts (-81.9/contact) +
2D Compatibility (PS) -14976 + (NN) -2823 + (LL) 0
1D Compatibility (HY) -18800 + (ID) 7100
Total energy: -131374.0 ( -122.66 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_4RLT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RLT-query.scw
PDB file :
Tito_Scwrl_4RLT.pdb
: