Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAPKKKVAGLIKLQIVAGQANPAPPVGPALGQHGVNIMEFCKAYNAATENQRGNVIPVEITVYEDRSFTFTLKTPPAAKLLLKAAGVAKGSAEPHKTKVAKVTWDQVREIAETKKTDLNANDVDAAAKIIAGTARSMGITVE
2JQ7 Chain:A ((8-139))
---------QIKLQLPAGKATPAPPVGPALGQHGVNIMEFCKRFNAETADKAGMILPVVITVYEDKSFTFIIKTPPASFLLKKAAGIEKGSSEPKRKIVGKVTRKQIEEIAKTKMPDLNANSLEAAMKIIEGTAKSMGIEV-
General information:
TITO was launched using:
RESULT:
Template:
2JQ7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78867 for 898 contacts (-87.8/contact) +
2D Compatibility (PS) -14860 + (NN) -11464 + (LL) 672
1D Compatibility (HY) -12000 + (ID) 4400
Total energy: -120919.0 ( -134.65 by residue)
QMean score : 0.782
(partial model without unconserved sides chains):
PDB file :
Tito_2JQ7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JQ7-query.scw
PDB file :
Tito_Scwrl_2JQ7.pdb
: